PANTHER Gene Information

Gene Symbol(s):

VIT_08s0007g07570

Organism:

Vitis vinifera

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Gene Name:

CCR4-NOT transcription complex subunit 3

Gene ID:

Vitvi08g01833

Protein ID:

D7TI48

Persistent Id:

PTN001914279

Alternate Ids:

D7TI48_VITVI(UniProtKB-ID)	100253711(GeneID)
CBI29924(EMBL-CDS)	XP_010653835(refSeq)
D7TI48(Synonym)	731400054(GI)
Vitvi08g01833_t003(Ensembl_TRS)	Vitvi08g01833_P003(Ensembl_PRO)
Vitvi08g01833(Ensembl)	FN595991(EMBL)
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PANTHER Classification

PANTHER Family:	CCR4 NOT-RELATED (PTHR23326)
PANTHER Subfamily:	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 (PTHR23326:SF1)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:	nuclear-transcribed mRNA poly(A) tail shortening
PANTHER GO-slim Cellular Component:	CCR4-NOT complex P-body
PANTHER protein class:	general transcription factor

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	-
GO BP Complete:	regulation of DNA-templated transcription, nuclear-transcribed mRNA poly(A) tail shortening
GO CC Complete:	nucleus, cytoplasm, P-body, CCR4-NOT core complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
HUMAN\|HGNC=7879\|UniProtKB=O75175	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000046717.1\|UniProtKB=H2R0F5	Pan troglodytes	LDO
MACMU\|Ensembl=ENSMMUG00000009698.4\|UniProtKB=A0A1D5R6S1	Macaca mulatta	LDO
MOUSE\|MGI=MGI=2385261\|UniProtKB=Q8K0V4	Mus musculus	LDO
RAT\|RGD=1304771\|UniProtKB=D3ZUV9	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000014900.6\|UniProtKB=E1BCS1	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000003264.5\|UniProtKB=A0A287AE28	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000023181.4\|UniProtKB=A0A3Q2I9W3	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000014042.6\|UniProtKB=M3WJZ2	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845003854.1\|UniProtKB=A0A8I3MW67	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000004066.4\|UniProtKB=F6VWE8	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000042958.1\|UniProtKB=A0A6I8MYU4	Ornithorhynchus anatinus	LDO
ANOCA\|Ensembl=ENSACAG00000016085.4\|UniProtKB=A0A803TBF2	Anolis carolinensis	LDO
XENLA\|Gene=cnot3.L\|UniProtKB=A0A1L8FMY0	Xenopus laevis	O
XENLA\|Gene=cnot3.S\|UniProtKB=A0A8J0TD14	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-6087000\|UniProtKB=B2GUB5	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000011174.2\|UniProtKB=A0A3B3HTV2	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-040927-6\|UniProtKB=F1Q4L8	Danio rerio	O
ORYLA\|Ensembl=ENSORLG00000005982.2\|UniProtKB=A0A3B3IBR0	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-030131-5838\|UniProtKB=Q7ZVL4	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000000005.1\|UniProtKB=W5LV48	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000000293.3\|UniProtKB=F6ZZH3	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118429124\|UniProtKB=A0A9J7NA41	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC577531\|UniProtKB=A0A7M7HE11	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00003826\|UniProtKB=G5EFX8	Caenorhabditis elegans	LDO
CAEBR\|Gene_ORFName=CBG13301\|UniProtKB=A8XHI6	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00092717\|UniProtKB=A0A2A6BJ80	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0033029\|UniProtKB=Q7K126	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP009030\|UniProtKB=A0A1S4GZY5	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC002501\|UniProtKB=D6WH92	Tribolium castaneum	LDO
IXOSC\|EnsemblGenome=ISCW018972\|UniProtKB=B7PMA1	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG113765\|UniProtKB=T1EFW0	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG194142\|UniProtKB=T1FVR3	helobdella robusta	LDO
YEAST\|SGD=S000001300\|UniProtKB=P06102	Saccharomyces cerevisiae	O
EREGS\|EnsemblGenome=AGOS_ADL108C\|UniProtKB=Q75AN0	Eremothecium gossypii	O
YEAST\|SGD=S000006276\|UniProtKB=Q12514	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_ADL364C\|UniProtKB=Q75BD0	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000179957\|UniProtKB=Q5AD56	Candida albicans	O
CANAL\|CGD=CAL0000183176\|UniProtKB=A0A1D8PE87	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_E06435g\|UniProtKB=Q6C6T6	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_04585\|UniProtKB=C8V7V5	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_2G02070\|UniProtKB=Q4WIF1	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU03855\|UniProtKB=V5IKZ2	Neurospora crassa	LDO
SCLS1\|EnsemblGenome=SS1G_04986\|UniProtKB=A7EI44	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_05646\|UniProtKB=Q0URG8	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPAC1B3.05\|UniProtKB=O13870	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_04350\|UniProtKB=B6K6L5	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CNF03820\|UniProtKB=Q5KEY0	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_06395\|UniProtKB=A0A0D1DMF3	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_22510\|UniProtKB=H6QUS5	Puccinia graminis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_15693\|UniProtKB=F4NTU8	Batrachochytrium dendrobatidis	LDO
ENTH1\|EnsemblGenome=CL6EHI_119550\|UniProtKB=C4M7Y3	Entamoeba histolytica	LDO
DICDI\|dictyBase=DDB_G0272056\|UniProtKB=Q55AA8	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_32526\|UniProtKB=F0ZJ84	Dictyostelium purpureum	LDO
LEIMA\|EnsemblGenome=LMJF_25_1840\|UniProtKB=Q4Q9Q5	Leishmania major	LDO
TRYB2\|Gene_ORFName=Tb927.3.1920\|UniProtKB=Q57ZB9	Trypanosoma brucei	LDO
TRIV3\|Gene_ORFName=TVAG_080200\|UniProtKB=A2FBH3	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_043960\|UniProtKB=A2E0F6	Trichomonas vaginalis	LDO
PHYRM\|Gene=H3H724_PHYRM\|UniProtKB=H3H724	Phytophthora ramorum	O
PHYRM\|Gene=H3H0Y8_PHYRM\|UniProtKB=H3H0Y8	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_04g227350v5\|UniProtKB=A0A2K3DUR5	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00004p00093740\|UniProtKB=W1NEI1	Amborella trichopoda	LDO
AMBTC\|EnsemblGenome=AMTR_s00012p00217710\|UniProtKB=W1PIP6	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_37G00230\|UniProtKB=A0A0K9P581	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma04_g28030\|UniProtKB=A0A804IUR5	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma05_g02740\|UniProtKB=A0A804J047	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_034226mg\|UniProtKB=K4A5S2	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3001G151100\|UniProtKB=A0A1B6QJ43	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb052870\|UniProtKB=A0A1D6KZA9	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb218410\|UniProtKB=A0A1D6GLA6	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os03g0652100\|UniProtKB=Q7XZZ2	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_1g13450v3\|UniProtKB=I1GPX1	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.4HG0333000\|UniProtKB=A0A8I7B6N1	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS4D02G011300\|UniProtKB=A0A3B6JBU5	Triticum aestivum	LDO
WHEAT\|EnsemblGenome=TraesCS4B02G013500\|UniProtKB=A0A3B6IMN6	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4A02G300300\|UniProtKB=A0A3B6HXD1	Triticum aestivum	LDO
NELNU\|Gene=LOC104611168\|UniProtKB=A0A1U8QBW3	Nelumbo nucifera	O
NELNU\|Gene=LOC104597703\|UniProtKB=A0A1U7ZZB8	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110795502\|UniProtKB=A0A9R0K3B3	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr13g0582141\|UniProtKB=A0A251UBK6	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr14g0639831\|UniProtKB=A0A251TZ25	Helianthus annuus	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr06g0272111\|UniProtKB=A0A251TVH0	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C800407910\|UniProtKB=A0A9R1X0X9	Lactuca sativa	O
LACSA\|Gene_ORFName=LSAT_V11C600312810\|UniProtKB=A0A9R1X912	Lactuca sativa	O
LACSA\|Gene_ORFName=LSAT_V11C200070870\|UniProtKB=A0A9R1WBY8	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a000807mg\|UniProtKB=A0A022Q2C1	Erythranthe guttata	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a001672mg\|UniProtKB=A0A022RIY5	Erythranthe guttata	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a001296mg\|UniProtKB=A0A022PXW4	Erythranthe guttata	O
CAPAN\|EnsemblGenome=T459_08592\|UniProtKB=A0A2G2ZX08	Capsicum annuum	LDO
SOLLC\|EnsemblGenome=Solyc12g019860.2\|UniProtKB=A0A3Q7J6R4	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107822861\|UniProtKB=A0A1S4CUL4	Nicotiana tabacum	O
TOBAC\|Gene=LOC107822036\|UniProtKB=A0A1S4CSC6	Nicotiana tabacum	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_A02083\|UniProtKB=A0A059DHA5	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_C09P58750.1\|UniProtKB=A0A078IVN7	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_A10P21290.1\|UniProtKB=A0A078HNW2	Brassica napus	O
BRACM\|EnsemblGenome=Bra002144\|UniProtKB=M4CD63	Brassica campestris	O
BRANA\|Gene_ORFName=GSBRNA2T00003003001\|UniProtKB=A0A078IMU2	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra006446\|UniProtKB=M4CQF7	Brassica campestris	LDO
BRANA\|Gene_ORFName=GSBRNA2T00003001001\|UniProtKB=A0A078IJJ5	Brassica napus	O
BRACM\|EnsemblGenome=Bra006447\|UniProtKB=M4CQF8	Brassica campestris	O
ARATH\|TAIR=locus=2172389\|UniProtKB=A0A1P8B9R0	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107920023\|UniProtKB=A0A1U8KVE0	Gossypium hirsutum	O
GOSHI\|Gene=LOC107933858\|UniProtKB=A0A1U8M4A3	Gossypium hirsutum	O
GOSHI\|Gene=LOC107893651\|UniProtKB=A0A1U8I7K4	Gossypium hirsutum	O
GOSHI\|Gene=LOC107888554\|UniProtKB=A0A1U8HQ94	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_026449\|UniProtKB=A0A061F2E9	Theobroma cacao	LDO
POPTR\|EnsemblGenome=POPTR_019G032800v3\|UniProtKB=A0A2K1WNS9	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_013G059800v3\|UniProtKB=A0A2K1Y1P8	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_09G142400\|UniProtKB=A0A2C9VC74	Manihot esculenta	O
MANES\|EnsemblGenome=MANES_08G149400\|UniProtKB=A0A2C9VIU3	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1121820\|UniProtKB=B9SHH5	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_02G071300\|UniProtKB=I1JD46	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_16G152500\|UniProtKB=I1MNT5	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_19G109500\|UniProtKB=K7MXS5	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_16G042600\|UniProtKB=I1ML38	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_7g085350\|UniProtKB=A2Q5Q7	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr03_00060\|UniProtKB=A0A2I4FMG6	Juglans regia	LDO
JUGRE\|EnsemblGenome=Jr03_00070\|UniProtKB=A0A2I4FME7	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_3G843850\|UniProtKB=A0A0A0LI87	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_5G242100\|UniProtKB=A0A251PES6	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_109010\|UniProtKB=D8S593	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_93109\|UniProtKB=D8RGN9	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c8_22460\|UniProtKB=A0A2K1K8D7	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0036s0115\|UniProtKB=A0A2R6X4W0	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_004430010\|UniProtKB=A0A1Y1IIP1	Klebsormidium nitens	O
KLENI\|Gene_ORFName=KFL_000120140\|UniProtKB=A0A1Y1HP35	Klebsormidium nitens	LDO