PANTHER Gene Information

Gene Symbol(s):

cnot3

Organism:

Xenopus tropicalis

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Gene Name:

CCR4-NOT transcription complex subunit 3

Gene ID:

XB-GENE-6087000

Protein ID:

B2GUB5

Persistent Id:

PTN008597693

Alternate Ids:

100158546(GeneID)	B2GUB5_XENTR(UniProtKB-ID)
BC166211(EMBL)	B2GUB5(Synonym)
183986457(GI)	AAI66211(EMBL-CDS)
NP_001121452(refSeq)
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PANTHER Classification

PANTHER Family:	CCR4 NOT-RELATED (PTHR23326)
PANTHER Subfamily:	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 3 (PTHR23326:SF1)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:	nuclear-transcribed mRNA poly(A) tail shortening
PANTHER GO-slim Cellular Component:	CCR4-NOT complex P-body
PANTHER protein class:	general transcription factor

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

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GO MF Complete:	-
GO BP Complete:	regulation of stem cell population maintenance, regulation of DNA-templated transcription, nuclear-transcribed mRNA poly(A) tail shortening
GO CC Complete:	nucleus, cytoplasm, P-body, CCR4-NOT core complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Generic Transcription Pathway, RNA Polymerase II Transcription, TP53 Regulates Transcription of Cell Cycle Genes, Gene expression (Transcription), TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain, Transcriptional Regulation by TP53, Metabolism of RNA, Deadenylation-dependent mRNA decay, Deadenylation of mRNA

Orthologs

ID	Organism	Type
HUMAN\|HGNC=7879\|UniProtKB=O75175	Homo sapiens	LDO
PANTR\|Ensembl=ENSPTRG00000046717.1\|UniProtKB=H2R0F5	Pan troglodytes	LDO
MACMU\|Ensembl=ENSMMUG00000009698.4\|UniProtKB=A0A1D5R6S1	Macaca mulatta	LDO
MOUSE\|MGI=MGI=2385261\|UniProtKB=Q8K0V4	Mus musculus	LDO
RAT\|RGD=1304771\|UniProtKB=D3ZUV9	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000014900.6\|UniProtKB=E1BCS1	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000003264.5\|UniProtKB=A0A287AE28	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000023181.4\|UniProtKB=A0A3Q2I9W3	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000014042.6\|UniProtKB=M3WJZ2	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845003854.1\|UniProtKB=A0A8I3MW67	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000004066.4\|UniProtKB=F6VWE8	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000042958.1\|UniProtKB=A0A6I8MYU4	Ornithorhynchus anatinus	LDO
ANOCA\|Ensembl=ENSACAG00000016085.4\|UniProtKB=A0A803TBF2	Anolis carolinensis	LDO
XENLA\|Gene=cnot3.L\|UniProtKB=A0A1L8FMY0	Xenopus laevis	O
XENLA\|Gene=cnot3.S\|UniProtKB=A0A8J0TD14	Xenopus laevis	LDO
ORYLA\|Ensembl=ENSORLG00000011174.2\|UniProtKB=A0A3B3HTV2	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-040927-6\|UniProtKB=F1Q4L8	Danio rerio	O
ORYLA\|Ensembl=ENSORLG00000005982.2\|UniProtKB=A0A3B3IBR0	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-030131-5838\|UniProtKB=Q7ZVL4	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000000005.1\|UniProtKB=W5LV48	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000000293.3\|UniProtKB=F6ZZH3	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118429124\|UniProtKB=A0A9J7NA41	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC577531\|UniProtKB=A0A7M7HE11	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00003826\|UniProtKB=G5EFX8	Caenorhabditis elegans	LDO
CAEBR\|Gene_ORFName=CBG13301\|UniProtKB=A8XHI6	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00092717\|UniProtKB=A0A2A6BJ80	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0033029\|UniProtKB=Q7K126	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP009030\|UniProtKB=A0A1S4GZY5	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC002501\|UniProtKB=D6WH92	Tribolium castaneum	LDO
IXOSC\|EnsemblGenome=ISCW018972\|UniProtKB=B7PMA1	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG113765\|UniProtKB=T1EFW0	helobdella robusta	O
HELRO\|EnsemblGenome=HelroG194142\|UniProtKB=T1FVR3	helobdella robusta	LDO
YEAST\|SGD=S000001300\|UniProtKB=P06102	Saccharomyces cerevisiae	O
EREGS\|EnsemblGenome=AGOS_ADL108C\|UniProtKB=Q75AN0	Eremothecium gossypii	O
YEAST\|SGD=S000006276\|UniProtKB=Q12514	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_ADL364C\|UniProtKB=Q75BD0	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000179957\|UniProtKB=Q5AD56	Candida albicans	O
CANAL\|CGD=CAL0000183176\|UniProtKB=A0A1D8PE87	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_E06435g\|UniProtKB=Q6C6T6	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_04585\|UniProtKB=C8V7V5	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_2G02070\|UniProtKB=Q4WIF1	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU03855\|UniProtKB=V5IKZ2	Neurospora crassa	LDO
SCLS1\|EnsemblGenome=SS1G_04986\|UniProtKB=A7EI44	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_05646\|UniProtKB=Q0URG8	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPAC1B3.05\|UniProtKB=O13870	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_04350\|UniProtKB=B6K6L5	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CNF03820\|UniProtKB=Q5KEY0	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_06395\|UniProtKB=A0A0D1DMF3	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_22510\|UniProtKB=H6QUS5	Puccinia graminis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_15693\|UniProtKB=F4NTU8	Batrachochytrium dendrobatidis	LDO
ENTH1\|EnsemblGenome=CL6EHI_119550\|UniProtKB=C4M7Y3	Entamoeba histolytica	LDO
DICDI\|dictyBase=DDB_G0272056\|UniProtKB=Q55AA8	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_32526\|UniProtKB=F0ZJ84	Dictyostelium purpureum	LDO
LEIMA\|EnsemblGenome=LMJF_25_1840\|UniProtKB=Q4Q9Q5	Leishmania major	LDO
TRYB2\|Gene_ORFName=Tb927.3.1920\|UniProtKB=Q57ZB9	Trypanosoma brucei	LDO
TRIV3\|Gene_ORFName=TVAG_080200\|UniProtKB=A2FBH3	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_043960\|UniProtKB=A2E0F6	Trichomonas vaginalis	LDO
PHYRM\|Gene=H3H724_PHYRM\|UniProtKB=H3H724	Phytophthora ramorum	O
PHYRM\|Gene=H3H0Y8_PHYRM\|UniProtKB=H3H0Y8	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_04g227350v5\|UniProtKB=A0A2K3DUR5	Chlamydomonas reinhardtii	LDO
PHYPA\|EnsemblGenome=Pp3c24_19770\|UniProtKB=A0A2K1IHE8	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0027s0010\|UniProtKB=A0A2R6X9U1	Marchantia polymorpha	O
AMBTC\|EnsemblGenome=AMTR_s00004p00093740\|UniProtKB=W1NEI1	Amborella trichopoda	LDO
AMBTC\|EnsemblGenome=AMTR_s00012p00217710\|UniProtKB=W1PIP6	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_37G00230\|UniProtKB=A0A0K9P581	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma04_g28030\|UniProtKB=A0A804IUR5	Musa acuminata subsp. malaccensis	O
MUSAM\|EnsemblGenome=Ma05_g02740\|UniProtKB=A0A804J047	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_034226mg\|UniProtKB=K4A5S2	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3001G151100\|UniProtKB=A0A1B6QJ43	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb052870\|UniProtKB=A0A1D6KZA9	Zea mays	O
MAIZE\|EnsemblGenome=Zm00001eb218410\|UniProtKB=A0A1D6GLA6	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os03g0652100\|UniProtKB=Q7XZZ2	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_1g13450v3\|UniProtKB=I1GPX1	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.4HG0333000\|UniProtKB=A0A8I7B6N1	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS4D02G011300\|UniProtKB=A0A3B6JBU5	Triticum aestivum	LDO
WHEAT\|EnsemblGenome=TraesCS4B02G013500\|UniProtKB=A0A3B6IMN6	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4A02G300300\|UniProtKB=A0A3B6HXD1	Triticum aestivum	LDO
NELNU\|Gene=LOC104611168\|UniProtKB=A0A1U8QBW3	Nelumbo nucifera	O
NELNU\|Gene=LOC104597703\|UniProtKB=A0A1U7ZZB8	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110795502\|UniProtKB=A0A9R0K3B3	Spinacia oleracea	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr13g0582141\|UniProtKB=A0A251UBK6	Helianthus annuus	O
HELAN\|EnsemblGenome=HanXRQr2_Chr14g0639831\|UniProtKB=A0A251TZ25	Helianthus annuus	LDO
HELAN\|EnsemblGenome=HanXRQr2_Chr06g0272111\|UniProtKB=A0A251TVH0	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C800407910\|UniProtKB=A0A9R1X0X9	Lactuca sativa	O
LACSA\|Gene_ORFName=LSAT_V11C600312810\|UniProtKB=A0A9R1X912	Lactuca sativa	O
LACSA\|Gene_ORFName=LSAT_V11C200070870\|UniProtKB=A0A9R1WBY8	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a000807mg\|UniProtKB=A0A022Q2C1	Erythranthe guttata	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a001672mg\|UniProtKB=A0A022RIY5	Erythranthe guttata	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a001296mg\|UniProtKB=A0A022PXW4	Erythranthe guttata	O
CAPAN\|EnsemblGenome=T459_08592\|UniProtKB=A0A2G2ZX08	Capsicum annuum	LDO
SOLLC\|EnsemblGenome=Solyc12g019860.2\|UniProtKB=A0A3Q7J6R4	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107822861\|UniProtKB=A0A1S4CUL4	Nicotiana tabacum	O
TOBAC\|Gene=LOC107822036\|UniProtKB=A0A1S4CSC6	Nicotiana tabacum	LDO
VITVI\|EnsemblGenome=Vitvi08g01833\|UniProtKB=D7TI48	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_A02083\|UniProtKB=A0A059DHA5	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=DARMORV10_C09P58750.1\|UniProtKB=A0A078IVN7	Brassica napus	O
BRANA\|Gene_ORFName=DARMORV10_A10P21290.1\|UniProtKB=A0A078HNW2	Brassica napus	O
BRACM\|EnsemblGenome=Bra002144\|UniProtKB=M4CD63	Brassica campestris	O
BRANA\|Gene_ORFName=GSBRNA2T00003003001\|UniProtKB=A0A078IMU2	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra006446\|UniProtKB=M4CQF7	Brassica campestris	LDO
BRANA\|Gene_ORFName=GSBRNA2T00003001001\|UniProtKB=A0A078IJJ5	Brassica napus	O
BRACM\|EnsemblGenome=Bra006447\|UniProtKB=M4CQF8	Brassica campestris	O
ARATH\|TAIR=locus=2172389\|UniProtKB=A0A1P8B9R0	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107920023\|UniProtKB=A0A1U8KVE0	Gossypium hirsutum	O
GOSHI\|Gene=LOC107933858\|UniProtKB=A0A1U8M4A3	Gossypium hirsutum	O
GOSHI\|Gene=LOC107893651\|UniProtKB=A0A1U8I7K4	Gossypium hirsutum	O
GOSHI\|Gene=LOC107888554\|UniProtKB=A0A1U8HQ94	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_026449\|UniProtKB=A0A061F2E9	Theobroma cacao	LDO
POPTR\|EnsemblGenome=POPTR_019G032800v3\|UniProtKB=A0A2K1WNS9	Populus trichocarpa	O
POPTR\|EnsemblGenome=POPTR_013G059800v3\|UniProtKB=A0A2K1Y1P8	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_09G142400\|UniProtKB=A0A2C9VC74	Manihot esculenta	O
MANES\|EnsemblGenome=MANES_08G149400\|UniProtKB=A0A2C9VIU3	Manihot esculenta	LDO
RICCO\|Gene_ORFName=RCOM_1121820\|UniProtKB=B9SHH5	Ricinus communis	LDO
SOYBN\|EnsemblGenome=GLYMA_02G071300\|UniProtKB=I1JD46	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_16G152500\|UniProtKB=I1MNT5	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_19G109500\|UniProtKB=K7MXS5	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_16G042600\|UniProtKB=I1ML38	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_7g085350\|UniProtKB=A2Q5Q7	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr03_00060\|UniProtKB=A0A2I4FMG6	Juglans regia	LDO
JUGRE\|EnsemblGenome=Jr03_00070\|UniProtKB=A0A2I4FME7	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_3G843850\|UniProtKB=A0A0A0LI87	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_5G242100\|UniProtKB=A0A251PES6	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_109010\|UniProtKB=D8S593	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_93109\|UniProtKB=D8RGN9	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c8_22460\|UniProtKB=A0A2K1K8D7	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0036s0115\|UniProtKB=A0A2R6X4W0	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_004430010\|UniProtKB=A0A1Y1IIP1	Klebsormidium nitens	O
KLENI\|Gene_ORFName=KFL_000120140\|UniProtKB=A0A1Y1HP35	Klebsormidium nitens	LDO