PANTHER Gene Information

Gene Symbol(s):

RCOM_0255520

Organism:

Ricinus communis

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Gene Name:

U4_U6 small nuclear ribonucleoprotein Prp4, putative

Gene ID:

RCOM_0255520

Protein ID:

B9SVT1

Persistent Id:

PTN004517974

Alternate Ids:

B9SVT1_RICCO(UniProtKB-ID)	XM_002530054(refSeq)
EEF32299(EMBL-CDS)	EQ974174(EMBL)
223530411(GI)	B9SVT1(Synonym)
8268021(GeneID)
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PANTHER Classification

PANTHER Family:	WD40 REPEAT PROTEIN (PTHR19846)
PANTHER Subfamily:	PRE-MRNA PROCESSING FACTOR 4 (PTHR19846:SF0)
PANTHER GO-slim Molecular Function:
PANTHER GO-slim Biological Process:
PANTHER GO-slim Cellular Component:
PANTHER protein class:	RNA splicing factor

Pathway Categories:

mRNA splicing

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	histone H2AK5 acetyltransferase activity, acyltransferase activity, histone H3K9 acetyltransferase activity, histone H2BK5 acetyltransferase activity, histone H3K23 acetyltransferase activity, histone H3K4 acetyltransferase activity, histone H4K16 acetyltransferase activity, histone H3K18 acetyltransferase activity, histone H2BK12 acetyltransferase activity, histone H4K8 acetyltransferase activity, histone H3K36 acetyltransferase activity, histone H4K5 acetyltransferase activity, histone H3K27 acetyltransferase activity, histone H3K122 acetyltransferase activity, histone H4K12 acetyltransferase activity, U6 snRNA binding, histone H2AK9 acetyltransferase activity, histone H3K14 acetyltransferase activity, histone H3K56 acetyltransferase activity, U4 snRNA binding
GO BP Complete:	chromatin remodeling, mRNA splicing, via spliceosome
GO CC Complete:	U4/U6 x U5 tri-snRNP complex, ribonucleoprotein complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
BRAFL\|Gene=LOC118430517\|UniProtKB=A0A9J7N8Z4	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC756678\|UniProtKB=A0A7M7HLC6	Strongylocentrotus purpuratus	O
PANTR\|Ensembl=ENSPTRG00000004051.6\|UniProtKB=A0A2I3RXY5	Pan troglodytes	O
BOVIN\|Ensembl=ENSBTAG00000003679\|UniProtKB=Q148I1	Bos taurus	O
HUMAN\|HGNC=17349\|UniProtKB=O43172	Homo sapiens	LDO
GORGO\|Ensembl=ENSGGOG00000006943.3\|UniProtKB=G3QVM3	Gorilla gorilla gorilla	LDO
MACMU\|Ensembl=ENSMMUG00000005844.4\|UniProtKB=F6TT47	Macaca mulatta	LDO
MOUSE\|MGI=MGI=1917302\|UniProtKB=Q9DAW6	Mus musculus	LDO
RAT\|RGD=1311303\|UniProtKB=D4A7J8	Rattus norvegicus	LDO
BOVIN\|Ensembl=ENSBTAG00000004571\|UniProtKB=Q3MHE2	Bos taurus	LDO
PIG\|Ensembl=ENSSSCG00000024648.4\|UniProtKB=I3LDL8	Sus scrofa	LDO
HORSE\|Ensembl=ENSECAG00000007072.4\|UniProtKB=F7CKR6	Equus caballus	LDO
FELCA\|Ensembl=ENSFCAG00000005514.5\|UniProtKB=M3W473	Felis catus	LDO
CANLF\|Ensembl=ENSCAFG00845007763.1\|UniProtKB=A0A8I3N4S1	Canis lupus familiaris	LDO
MONDO\|Ensembl=ENSMODG00000004444.3\|UniProtKB=F6RSY7	Monodelphis domestica	LDO
ORNAN\|Ensembl=ENSOANG00000012190.3\|UniProtKB=F7FVS0	Ornithorhynchus anatinus	LDO
CHICK\|Ensembl=ENSGALG00010027948.1\|UniProtKB=A0A8V1AGK5	Gallus gallus	LDO
ANOCA\|Ensembl=ENSACAG00000015110.4\|UniProtKB=A0A803T3K5	Anolis carolinensis	LDO
XENLA\|Gene=prpf4.L\|UniProtKB=A0A1L8F5Q2	Xenopus laevis	LDO
XENTR\|Xenbase=XB-GENE-493298\|UniProtKB=Q6P8A5	Xenopus tropicalis	LDO
ORYLA\|Ensembl=ENSORLG00000019641.2\|UniProtKB=H2MZD4	Oryzias latipes	LDO
DANRE\|ZFIN=ZDB-GENE-030131-5143\|UniProtKB=Q6PH45	Danio rerio	LDO
LEPOC\|Ensembl=ENSLOCG00000000581.1\|UniProtKB=W5LWY9	lepisosteus oculatus	LDO
CIOIN\|Ensembl=ENSCING00000001299.3\|UniProtKB=F6WWK0	Ciona intestinalis	LDO
BRAFL\|Gene=LOC118421259\|UniProtKB=A0A9J7LM63	Branchiostoma floridae	LDO
STRPU\|EnsemblGenome=LOC590747\|UniProtKB=A0A7M7PMP1	Strongylocentrotus purpuratus	LDO
CAEEL\|WormBase=WBGene00007972\|UniProtKB=Q93339	Caenorhabditis elegans	LDO
CAEBR\|WormBase=WBGene00033315\|UniProtKB=A8XF84	Caenorhabditis briggsae	LDO
PRIPA\|EnsemblGenome=WBGene00305085\|UniProtKB=A0A8R1Z6X8	Pristionchus pacificus	LDO
DROME\|FlyBase=FBgn0036733\|UniProtKB=Q9VVI0	Drosophila melanogaster	LDO
ANOGA\|EnsemblGenome=AGAP002144\|UniProtKB=Q7QK43	Anopheles gambiae	LDO
TRICA\|EnsemblGenome=TC000271\|UniProtKB=D6WBF5	Tribolium castaneum	LDO
DAPPU\|EnsemblGenome=DAPPUDRAFT_299967\|UniProtKB=E9FRG9	Daphnia pulex	LDO
IXOSC\|EnsemblGenome=ISCW017325\|UniProtKB=B7P9Z1	Ixodes scapularis	O
IXOSC\|EnsemblGenome=ISCW014239\|UniProtKB=B7QJT1	Ixodes scapularis	LDO
HELRO\|EnsemblGenome=HelroG105872\|UniProtKB=T1EDY0	helobdella robusta	LDO
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g241701\|UniProtKB=A7RZ49	Nematostella vectensis	LDO
TRIAD\|EnsemblGenome=TriadG21736\|UniProtKB=B3RNA4	Trichoplax adhaerens	LDO
MONBE\|EnsemblGenome=MONBRDRAFT_37807\|UniProtKB=A9V3J2	Monosiga brevicollis	LDO
YEAST\|SGD=S000006382\|UniProtKB=P20053	Saccharomyces cerevisiae	LDO
EREGS\|EnsemblGenome=AGOS_AEL269C\|UniProtKB=Q758V7	Eremothecium gossypii	LDO
CANAL\|CGD=CAL0000188618\|UniProtKB=A0A1D8PU02	Candida albicans	LDO
YARLI\|EnsemblGenome=YALI0_E28226g\|UniProtKB=Q6C4B6	Yarrowia lipolytica	LDO
EMENI\|EnsemblGenome=ANIA_01468\|UniProtKB=Q5BDB2	Emericella nidulans	LDO
ASPFU\|EnsemblGenome=AFUA_8G04590\|UniProtKB=Q4WCF6	Neosartorya fumigata	LDO
NEUCR\|EnsemblGenome=NCU11251\|UniProtKB=V5IRK9	Neurospora crassa	LDO
SCLS1\|EnsemblGenome=SS1G_01423\|UniProtKB=A7E7Z5	Sclerotinia sclerotiorum	LDO
PHANO\|EnsemblGenome=SNOG_04483\|UniProtKB=Q0UUT1	Phaeosphaeria nodorum	LDO
SCHPO\|PomBase=SPAC227.12\|UniProtKB=Q9UTC7	Schizosaccharomyces pombe	LDO
SCHJY\|EnsemblGenome=SJAG_00531\|UniProtKB=B6JVW5	Schizosaccharomyces japonicus	LDO
CRYNJ\|EnsemblGenome=CND05530\|UniProtKB=Q5KHR9	Cryptococcus neoformans	LDO
USTMA\|EnsemblGenome=UMAG_05432\|UniProtKB=A0A0D1CHJ8	Ustilago maydis	LDO
PUCGT\|EnsemblGenome=PGTG_02141\|UniProtKB=E3JXA5	Puccinia graminis	LDO
BATDJ\|Gene_ORFName=BATDEDRAFT_9970\|UniProtKB=F4NYN0	Batrachochytrium dendrobatidis	LDO
ENTH1\|EnsemblGenome=CL6EHI_040300\|UniProtKB=C4M2F9	Entamoeba histolytica	LDO
DICDI\|dictyBase=DDB_G0287635\|UniProtKB=Q54K20	Dictyostelium discoideum	LDO
DICPU\|EnsemblGenome=DICPUDRAFT_78987\|UniProtKB=F0ZL79	Dictyostelium purpureum	LDO
LEIMA\|EnsemblGenome=LMJF_21_1120\|UniProtKB=Q4QC84	Leishmania major	LDO
TRYB2\|Gene_ORFName=Tb10.70.7190\|UniProtKB=Q38CE4	Trypanosoma brucei	LDO
TRIV3\|Gene_ORFName=TVAG_403650\|UniProtKB=A2ELP3	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_063230\|UniProtKB=A2DLT5	Trichomonas vaginalis	LDO
PLAF7\|EnsemblGenome=PF3D7_1343900\|UniProtKB=C0H5G7	Plasmodium falciparum	LDO
PARTE\|EnsemblGenome=GSPATT00012568001\|UniProtKB=A0D1X6	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00037851001\|UniProtKB=A0CF45	Paramecium tetraurelia	LDO
THAPS\|EnsemblGenome=THAPSDRAFT_260891\|UniProtKB=B8BQI8	Thalassiosira pseudonana	LDO
PHYRM\|Gene=H3GS79_PHYRM\|UniProtKB=H3GS79	Phytophthora ramorum	LDO
CHLRE\|EnsemblGenome=CHLRE_16g662800v5\|UniProtKB=A0A2K3CTM4	Chlamydomonas reinhardtii	LDO
AMBTC\|EnsemblGenome=AMTR_s00002p00265600\|UniProtKB=W1P0F9	Amborella trichopoda	LDO
ZOSMR\|Gene_ORFName=ZOSMA_174G00370\|UniProtKB=A0A0K9PSA6	Zostera marina	LDO
MUSAM\|EnsemblGenome=Ma11_g18720\|UniProtKB=A0A804L9C1	Musa acuminata subsp. malaccensis	LDO
SETIT\|EnsemblGenome=SETIT_035163mg\|UniProtKB=K4A8F7	Setaria italica	LDO
SORBI\|EnsemblGenome=SORBI_3001G370300\|UniProtKB=C5WZR9	Sorghum bicolor	LDO
MAIZE\|EnsemblGenome=Zm00001eb017050\|UniProtKB=A0A1D6K3B8	Zea mays	LDO
ORYSJ\|EnsemblGenome=Os03g0355200\|UniProtKB=Q10LA2	Oryza sativa	LDO
BRADI\|EnsemblGenome=BRADI_1g62257v3\|UniProtKB=I1H5E6	Brachypodium distachyon	LDO
HORVV\|EnsemblGenome=HORVU.MOREX.r3.2HG0127160\|UniProtKB=A0A8I7B5F0	Hordeum vulgare subsp. vulgare	O
WHEAT\|EnsemblGenome=TraesCS2A02G175200\|UniProtKB=A0A3B6AV20	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2D02G182600\|UniProtKB=A0A3B6D9P3	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS2B02G201600\|UniProtKB=A0A3B6C2Q3	Triticum aestivum	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.4HG0365000\|UniProtKB=F2DGM0	Hordeum vulgare subsp. vulgare	LDO
WHEAT\|EnsemblGenome=TraesCS4D02G160600\|UniProtKB=A0A3B6JHS3	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4A02G149100\|UniProtKB=A0A3B6HWG3	Triticum aestivum	O
WHEAT\|EnsemblGenome=TraesCS4B02G163800\|UniProtKB=A0A3B6IP52	Triticum aestivum	LDO
NELNU\|Gene_ORFName=HUJ06_001810\|UniProtKB=A0A1U7ZW44	Nelumbo nucifera	LDO
SPIOL\|Gene=LOC110775559\|UniProtKB=A0A9R0JIL2	Spinacia oleracea	LDO
HELAN\|Gene_ORFName=HanXRQr2_Chr17g0818671\|UniProtKB=A0A9K3DK23	Helianthus annuus	LDO
LACSA\|Gene_ORFName=LSAT_V11C400173630\|UniProtKB=A0A9R1XF16	Lactuca sativa	LDO
ERYGU\|Gene_ORFName=MIMGU_mgv1a003585mg\|UniProtKB=A0A022PSD0	Erythranthe guttata	LDO
CAPAN\|EnsemblGenome=T459_13627\|UniProtKB=A0A2G2ZF43	Capsicum annuum	LDO
SOLTU\|EnsemblGenome=PGSC0003DMG400012703\|UniProtKB=M1AYL0	Solanum tuberosum	LDO
SOLLC\|EnsemblGenome=Solyc04g016510.3\|UniProtKB=A0A3Q7G2B1	Solanum lycopersicum	LDO
TOBAC\|Gene=LOC107801611\|UniProtKB=A0A1S4AUP3	Nicotiana tabacum	LDO
TOBAC\|Gene=LOC107800703\|UniProtKB=A0A1S4ASC6	Nicotiana tabacum	LDO
VITVI\|Gene_OrderedLocusName=VIT_08s0007g05930\|UniProtKB=F6HLM8	Vitis vinifera	LDO
EUCGR\|EnsemblGenome=EUGRSUZ_A02297\|UniProtKB=A0A059DHR1	Eucalyptus grandis	LDO
BRANA\|Gene_ORFName=GSBRNA2T00024262001\|UniProtKB=A0A078GBL0	Brassica napus	O
BRACM\|EnsemblGenome=Bra004625\|UniProtKB=M4CK91	Brassica campestris	O
BRANA\|Gene_ORFName=GSBRNA2T00084638001\|UniProtKB=A0A078FNQ1	Brassica napus	LDO
BRACM\|EnsemblGenome=Bra016929\|UniProtKB=M4DKA0	Brassica campestris	LDO
ARATH\|TAIR=locus=2063349\|UniProtKB=Q9SIB8	Arabidopsis thaliana	O
ARATH\|TAIR=locus=2060560\|UniProtKB=O22212	Arabidopsis thaliana	LDO
GOSHI\|Gene=LOC107929465\|UniProtKB=A0A1U8LPA1	Gossypium hirsutum	O
GOSHI\|Gene=LOC107929129\|UniProtKB=A0A1U8LMY9	Gossypium hirsutum	LDO
THECC\|EnsemblGenome=TCM_007489\|UniProtKB=A0A061E961	Theobroma cacao	LDO
CITSI\|Gene_ORFName=CISIN_1g008050mg\|UniProtKB=A0A067DL85	Citrus sinensis	LDO
POPTR\|EnsemblGenome=POPTR_006G045800v3\|UniProtKB=A0A2K1ZWR7	Populus trichocarpa	LDO
MANES\|EnsemblGenome=MANES_09G015900\|UniProtKB=A0A2C9V8N1	Manihot esculenta	LDO
SOYBN\|EnsemblGenome=GLYMA_02G190600\|UniProtKB=I1JGD6	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_10G000800\|UniProtKB=I1L7B7	Glycine max	LDO
MEDTR\|EnsemblGenome=MTR_5g022690\|UniProtKB=G7JXL0	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_3g045130\|UniProtKB=A0A072V5R5	Medicago truncatula	LDO
JUGRE\|EnsemblGenome=Jr03_05200\|UniProtKB=A0A6P9EP78	Juglans regia	LDO
CUCSA\|EnsemblGenome=Csa_6G404170\|UniProtKB=A0A0A0KHD8	Cucumis sativus	LDO
PRUPE\|EnsemblGenome=PRUPE_7G050300\|UniProtKB=A0A251N6V4	Prunus persica	LDO
SELML\|EnsemblGenome=SELMODRAFT_81344\|UniProtKB=D8QZK5	Selaginella moellendorffii	LDO
SELML\|EnsemblGenome=SELMODRAFT_442802\|UniProtKB=D8RWA3	Selaginella moellendorffii	LDO
PHYPA\|EnsemblGenome=Pp3c9_11970\|UniProtKB=A0A2K1K2V4	Physcomitrella patens	LDO
MARPO\|EnsemblGenome=MARPO_0013s0144\|UniProtKB=A0A2R6XIP1	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0312s0002\|UniProtKB=A0A2R6VZ32	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0014s0154\|UniProtKB=A0A2R6XHR2	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0061s0123\|UniProtKB=A0A2R6WSP6	Marchantia polymorpha	LDO
KLENI\|Gene_ORFName=KFL_000020700\|UniProtKB=A0A1Y1HKQ5	Klebsormidium nitens	LDO