PANTHER Gene Information

Gene Symbol(s):

CFC21_028828

Organism:

Triticum aestivum

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Gene Name:

Pre-mRNA processing factor 4 (PRP4)-like domain-containing protein

Gene ID:

TraesCS2D02G182600

Protein ID:

A0A3B6D9P3

Persistent Id:

PTN007816654

Alternate Ids:

A0A3B6D9P3_WHEAT(UniProtKB-ID)	KAF7014897(EMBL-CDS)
CM022216(EMBL)	TraesCS2D02G182600(Ensembl)
A0A3B6D9P3(Synonym)
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PANTHER Classification

PANTHER Family:	WD40 REPEAT PROTEIN (PTHR19846)
PANTHER Subfamily:	PRE-MRNA PROCESSING FACTOR 4 (PRP4)-LIKE DOMAIN-CONTAINING PROTEIN (PTHR19846:SF7)
PANTHER GO-slim Molecular Function:	snRNA binding
PANTHER GO-slim Biological Process:	mRNA splicing, via spliceosome
PANTHER GO-slim Cellular Component:	U4/U6 x U5 tri-snRNP complex
PANTHER protein class:	RNA splicing factor

Pathway Categories:

No pathway information available

GENE ONTOLOGY DATABASE ANNOTATIONS

Click to Expand...

GO MF Complete:	U6 snRNA binding, U4 snRNA binding
GO BP Complete:	mRNA splicing, via spliceosome
GO CC Complete:	U4/U6 x U5 tri-snRNP complex

REACTOME DATABASE ANNOTATIONS Click to Expand...

Reactome Pathways:

Orthologs

ID	Organism	Type
BRAFL\|Gene=LOC118430517\|UniProtKB=A0A9J7N8Z4	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC756678\|UniProtKB=A0A7M7HLC6	Strongylocentrotus purpuratus	O
PANTR\|Ensembl=ENSPTRG00000004051.6\|UniProtKB=A0A2I3RXY5	Pan troglodytes	O
BOVIN\|Ensembl=ENSBTAG00000003679\|UniProtKB=Q148I1	Bos taurus	O
HUMAN\|HGNC=17349\|UniProtKB=O43172	Homo sapiens	O
GORGO\|Ensembl=ENSGGOG00000006943.3\|UniProtKB=G3QVM3	Gorilla gorilla gorilla	O
MACMU\|Ensembl=ENSMMUG00000005844.4\|UniProtKB=F6TT47	Macaca mulatta	O
MOUSE\|MGI=MGI=1917302\|UniProtKB=Q9DAW6	Mus musculus	O
RAT\|RGD=1311303\|UniProtKB=D4A7J8	Rattus norvegicus	O
BOVIN\|Ensembl=ENSBTAG00000004571\|UniProtKB=Q3MHE2	Bos taurus	O
PIG\|Ensembl=ENSSSCG00000024648.4\|UniProtKB=I3LDL8	Sus scrofa	O
HORSE\|Ensembl=ENSECAG00000007072.4\|UniProtKB=F7CKR6	Equus caballus	O
FELCA\|Ensembl=ENSFCAG00000005514.5\|UniProtKB=M3W473	Felis catus	O
CANLF\|Ensembl=ENSCAFG00845007763.1\|UniProtKB=A0A8I3N4S1	Canis lupus familiaris	O
MONDO\|Ensembl=ENSMODG00000004444.3\|UniProtKB=F6RSY7	Monodelphis domestica	O
ORNAN\|Ensembl=ENSOANG00000012190.3\|UniProtKB=F7FVS0	Ornithorhynchus anatinus	O
CHICK\|Ensembl=ENSGALG00010027948.1\|UniProtKB=A0A8V1AGK5	Gallus gallus	O
ANOCA\|Ensembl=ENSACAG00000015110.4\|UniProtKB=A0A803T3K5	Anolis carolinensis	O
XENLA\|Gene=prpf4.L\|UniProtKB=A0A1L8F5Q2	Xenopus laevis	O
XENTR\|Xenbase=XB-GENE-493298\|UniProtKB=Q6P8A5	Xenopus tropicalis	O
ORYLA\|Ensembl=ENSORLG00000019641.2\|UniProtKB=H2MZD4	Oryzias latipes	O
DANRE\|ZFIN=ZDB-GENE-030131-5143\|UniProtKB=Q6PH45	Danio rerio	O
LEPOC\|Ensembl=ENSLOCG00000000581.1\|UniProtKB=W5LWY9	lepisosteus oculatus	O
CIOIN\|Ensembl=ENSCING00000001299.3\|UniProtKB=F6WWK0	Ciona intestinalis	O
BRAFL\|Gene=LOC118421259\|UniProtKB=A0A9J7LM63	Branchiostoma floridae	O
STRPU\|EnsemblGenome=LOC590747\|UniProtKB=A0A7M7PMP1	Strongylocentrotus purpuratus	O
CAEEL\|WormBase=WBGene00007972\|UniProtKB=Q93339	Caenorhabditis elegans	O
CAEBR\|WormBase=WBGene00033315\|UniProtKB=A8XF84	Caenorhabditis briggsae	O
PRIPA\|EnsemblGenome=WBGene00305085\|UniProtKB=A0A8R1Z6X8	Pristionchus pacificus	O
DROME\|FlyBase=FBgn0036733\|UniProtKB=Q9VVI0	Drosophila melanogaster	O
ANOGA\|EnsemblGenome=AGAP002144\|UniProtKB=Q7QK43	Anopheles gambiae	O
TRICA\|EnsemblGenome=TC000271\|UniProtKB=D6WBF5	Tribolium castaneum	O
DAPPU\|EnsemblGenome=DAPPUDRAFT_299967\|UniProtKB=E9FRG9	Daphnia pulex	O
IXOSC\|EnsemblGenome=ISCW017325\|UniProtKB=B7P9Z1	Ixodes scapularis	O
IXOSC\|EnsemblGenome=ISCW014239\|UniProtKB=B7QJT1	Ixodes scapularis	O
HELRO\|EnsemblGenome=HelroG105872\|UniProtKB=T1EDY0	helobdella robusta	O
NEMVE\|EnsemblGenome=NEMVEDRAFT_v1g241701\|UniProtKB=A7RZ49	Nematostella vectensis	O
TRIAD\|EnsemblGenome=TriadG21736\|UniProtKB=B3RNA4	Trichoplax adhaerens	O
MONBE\|EnsemblGenome=MONBRDRAFT_37807\|UniProtKB=A9V3J2	Monosiga brevicollis	O
YEAST\|SGD=S000006382\|UniProtKB=P20053	Saccharomyces cerevisiae	O
EREGS\|EnsemblGenome=AGOS_AEL269C\|UniProtKB=Q758V7	Eremothecium gossypii	O
CANAL\|CGD=CAL0000188618\|UniProtKB=A0A1D8PU02	Candida albicans	O
YARLI\|EnsemblGenome=YALI0_E28226g\|UniProtKB=Q6C4B6	Yarrowia lipolytica	O
EMENI\|EnsemblGenome=ANIA_01468\|UniProtKB=Q5BDB2	Emericella nidulans	O
ASPFU\|EnsemblGenome=AFUA_8G04590\|UniProtKB=Q4WCF6	Neosartorya fumigata	O
NEUCR\|EnsemblGenome=NCU11251\|UniProtKB=V5IRK9	Neurospora crassa	O
SCLS1\|EnsemblGenome=SS1G_01423\|UniProtKB=A7E7Z5	Sclerotinia sclerotiorum	O
PHANO\|EnsemblGenome=SNOG_04483\|UniProtKB=Q0UUT1	Phaeosphaeria nodorum	O
SCHPO\|PomBase=SPAC227.12\|UniProtKB=Q9UTC7	Schizosaccharomyces pombe	O
SCHJY\|EnsemblGenome=SJAG_00531\|UniProtKB=B6JVW5	Schizosaccharomyces japonicus	O
CRYNJ\|EnsemblGenome=CND05530\|UniProtKB=Q5KHR9	Cryptococcus neoformans	O
USTMA\|EnsemblGenome=UMAG_05432\|UniProtKB=A0A0D1CHJ8	Ustilago maydis	O
PUCGT\|EnsemblGenome=PGTG_02141\|UniProtKB=E3JXA5	Puccinia graminis	O
BATDJ\|Gene_ORFName=BATDEDRAFT_9970\|UniProtKB=F4NYN0	Batrachochytrium dendrobatidis	O
ENTH1\|EnsemblGenome=CL6EHI_040300\|UniProtKB=C4M2F9	Entamoeba histolytica	O
DICDI\|dictyBase=DDB_G0287635\|UniProtKB=Q54K20	Dictyostelium discoideum	O
DICPU\|EnsemblGenome=DICPUDRAFT_78987\|UniProtKB=F0ZL79	Dictyostelium purpureum	O
LEIMA\|EnsemblGenome=LMJF_21_1120\|UniProtKB=Q4QC84	Leishmania major	O
TRYB2\|Gene_ORFName=Tb10.70.7190\|UniProtKB=Q38CE4	Trypanosoma brucei	O
TRIV3\|Gene_ORFName=TVAG_403650\|UniProtKB=A2ELP3	Trichomonas vaginalis	O
TRIV3\|Gene_ORFName=TVAG_063230\|UniProtKB=A2DLT5	Trichomonas vaginalis	O
PLAF7\|EnsemblGenome=PF3D7_1343900\|UniProtKB=C0H5G7	Plasmodium falciparum	O
PARTE\|EnsemblGenome=GSPATT00012568001\|UniProtKB=A0D1X6	Paramecium tetraurelia	O
PARTE\|EnsemblGenome=GSPATT00037851001\|UniProtKB=A0CF45	Paramecium tetraurelia	O
THAPS\|EnsemblGenome=THAPSDRAFT_260891\|UniProtKB=B8BQI8	Thalassiosira pseudonana	O
PHYRM\|Gene=H3GS79_PHYRM\|UniProtKB=H3GS79	Phytophthora ramorum	O
CHLRE\|EnsemblGenome=CHLRE_16g662800v5\|UniProtKB=A0A2K3CTM4	Chlamydomonas reinhardtii	O
AMBTC\|EnsemblGenome=AMTR_s00002p00265600\|UniProtKB=W1P0F9	Amborella trichopoda	O
ZOSMR\|Gene_ORFName=ZOSMA_174G00370\|UniProtKB=A0A0K9PSA6	Zostera marina	O
MUSAM\|EnsemblGenome=Ma11_g18720\|UniProtKB=A0A804L9C1	Musa acuminata subsp. malaccensis	O
SETIT\|EnsemblGenome=SETIT_035163mg\|UniProtKB=K4A8F7	Setaria italica	O
SORBI\|EnsemblGenome=SORBI_3001G370300\|UniProtKB=C5WZR9	Sorghum bicolor	O
MAIZE\|EnsemblGenome=Zm00001eb017050\|UniProtKB=A0A1D6K3B8	Zea mays	O
ORYSJ\|EnsemblGenome=Os03g0355200\|UniProtKB=Q10LA2	Oryza sativa	O
BRADI\|EnsemblGenome=BRADI_1g62257v3\|UniProtKB=I1H5E6	Brachypodium distachyon	O
HORVV\|EnsemblGenome=HORVU.MOREX.r3.2HG0127160\|UniProtKB=A0A8I7B5F0	Hordeum vulgare subsp. vulgare	O
NELNU\|Gene_ORFName=HUJ06_001810\|UniProtKB=A0A1U7ZW44	Nelumbo nucifera	O
SPIOL\|Gene=LOC110775559\|UniProtKB=A0A9R0JIL2	Spinacia oleracea	O
HELAN\|Gene_ORFName=HanXRQr2_Chr17g0818671\|UniProtKB=A0A9K3DK23	Helianthus annuus	O
LACSA\|Gene_ORFName=LSAT_V11C400173630\|UniProtKB=A0A9R1XF16	Lactuca sativa	O
ERYGU\|Gene_ORFName=MIMGU_mgv1a003585mg\|UniProtKB=A0A022PSD0	Erythranthe guttata	O
CAPAN\|EnsemblGenome=T459_13627\|UniProtKB=A0A2G2ZF43	Capsicum annuum	O
SOLTU\|EnsemblGenome=PGSC0003DMG400012703\|UniProtKB=M1AYL0	Solanum tuberosum	O
SOLLC\|EnsemblGenome=Solyc04g016510.3\|UniProtKB=A0A3Q7G2B1	Solanum lycopersicum	O
TOBAC\|Gene=LOC107801611\|UniProtKB=A0A1S4AUP3	Nicotiana tabacum	O
TOBAC\|Gene=LOC107800703\|UniProtKB=A0A1S4ASC6	Nicotiana tabacum	O
VITVI\|Gene_OrderedLocusName=VIT_08s0007g05930\|UniProtKB=F6HLM8	Vitis vinifera	O
EUCGR\|EnsemblGenome=EUGRSUZ_A02297\|UniProtKB=A0A059DHR1	Eucalyptus grandis	O
BRANA\|Gene_ORFName=GSBRNA2T00024262001\|UniProtKB=A0A078GBL0	Brassica napus	O
BRACM\|EnsemblGenome=Bra004625\|UniProtKB=M4CK91	Brassica campestris	O
BRANA\|Gene_ORFName=GSBRNA2T00084638001\|UniProtKB=A0A078FNQ1	Brassica napus	O
BRACM\|EnsemblGenome=Bra016929\|UniProtKB=M4DKA0	Brassica campestris	O
ARATH\|TAIR=locus=2063349\|UniProtKB=Q9SIB8	Arabidopsis thaliana	O
ARATH\|TAIR=locus=2060560\|UniProtKB=O22212	Arabidopsis thaliana	O
GOSHI\|Gene=LOC107929465\|UniProtKB=A0A1U8LPA1	Gossypium hirsutum	O
GOSHI\|Gene=LOC107929129\|UniProtKB=A0A1U8LMY9	Gossypium hirsutum	O
THECC\|EnsemblGenome=TCM_007489\|UniProtKB=A0A061E961	Theobroma cacao	O
CITSI\|Gene_ORFName=CISIN_1g008050mg\|UniProtKB=A0A067DL85	Citrus sinensis	O
POPTR\|EnsemblGenome=POPTR_006G045800v3\|UniProtKB=A0A2K1ZWR7	Populus trichocarpa	O
MANES\|EnsemblGenome=MANES_09G015900\|UniProtKB=A0A2C9V8N1	Manihot esculenta	O
RICCO\|Gene_ORFName=RCOM_0255520\|UniProtKB=B9SVT1	Ricinus communis	O
SOYBN\|EnsemblGenome=GLYMA_02G190600\|UniProtKB=I1JGD6	Glycine max	O
SOYBN\|EnsemblGenome=GLYMA_10G000800\|UniProtKB=I1L7B7	Glycine max	O
MEDTR\|EnsemblGenome=MTR_5g022690\|UniProtKB=G7JXL0	Medicago truncatula	O
MEDTR\|EnsemblGenome=MTR_3g045130\|UniProtKB=A0A072V5R5	Medicago truncatula	O
JUGRE\|EnsemblGenome=Jr03_05200\|UniProtKB=A0A6P9EP78	Juglans regia	O
CUCSA\|EnsemblGenome=Csa_6G404170\|UniProtKB=A0A0A0KHD8	Cucumis sativus	O
PRUPE\|EnsemblGenome=PRUPE_7G050300\|UniProtKB=A0A251N6V4	Prunus persica	O
SELML\|EnsemblGenome=SELMODRAFT_81344\|UniProtKB=D8QZK5	Selaginella moellendorffii	O
SELML\|EnsemblGenome=SELMODRAFT_442802\|UniProtKB=D8RWA3	Selaginella moellendorffii	O
PHYPA\|EnsemblGenome=Pp3c9_11970\|UniProtKB=A0A2K1K2V4	Physcomitrella patens	O
MARPO\|EnsemblGenome=MARPO_0013s0144\|UniProtKB=A0A2R6XIP1	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0312s0002\|UniProtKB=A0A2R6VZ32	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0014s0154\|UniProtKB=A0A2R6XHR2	Marchantia polymorpha	O
MARPO\|EnsemblGenome=MARPO_0061s0123\|UniProtKB=A0A2R6WSP6	Marchantia polymorpha	O
KLENI\|Gene_ORFName=KFL_000020700\|UniProtKB=A0A1Y1HKQ5	Klebsormidium nitens	O